rs11142467 chr9:70480970 C>A

Sequence
ttccaacccactttgtttgaggaa[C/A]cacacagacaaagagggaaaagac
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.83 0.89 2.4·10-40.96 1.90 3.43 Discordant
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Motif analysis

ANDR_HUMAN Discordant
ANDR_HUMAN pic

Genetic associations

GRASP alzheimers disease,  aortic valve calcium,  college completion,  hdl cholesterol,  neuroblastoma (brain cancer),  sporadic creutzfeldt-jakob disease,  stabilized warfarin dose,  triglycerides change with statins,  variant creutzfeldt-jakob disease,  years of education
GTEx eQTL Thyroid

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