rs11142517 chr9:70629264 C>T
- Sequence
gtttgaccacaagggggcgatatt[C/T]acctaaccgaagccaatgagaatt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM12891 (male B- cells lymphoblastoid cell line) LNCaP (prostate carcinoma) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.07 | 1.75 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.87 | 1.10 | 1.49 | n/a | No Hit |
Items per page:
1 – 2 of 2