rs11143754 chr9:74007152 C>A
- Sequence
atcctcccatagtcaattactgct[C/A]cctggtggtgagctcgccttcttt
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) GM12890 (Lymphoblastoid Cell Lines) RWPE2
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.14 | -0.81 | 1.29 | -1.02 | Weak Concordant | |||
| STAG1_HUMAN | 2.11 | -1.92 | 1.00 | n/a | n/a |
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Motif analysis
