rs11143961 chr9:74398018 G>A

Sequence
aacacttggttgagaaaaacagat[G/A]ttgatttattggaacctctcaaat
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.42 0.21 5.9·10-30.96 2.00 n/a No Hit
FOXA1_HUMAN 1.81 -0.43 8.1·10-31.00 2.00 -0.87 Weak Concordant
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Motif analysis

FOXA1_HUMAN Weak Concordant
FOXA1_HUMAN pic

Genetic associations

GRASP ldl cholesterol refractive error total cholesterol waist hip ratio

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