rs11145627 chr9:69193164 C>T
- Sequence
tcttgagctcagacgattcaccca[C/T]cttggcctcccaaagtgctgggat
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) MS-1 (Small cell lung carcinoma)
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM19238 (female B-cells lymphoblastoid cell lines) | 0.71 | -0.66 | 1.00 | |||
| MS-1 (Small cell lung carcinoma) | -0.32 | 0.47 | 1.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Ovary, Spleen, Testis, Thyroid, Whole_Blood