rs11147063 chr12:132762341 A>G
- Sequence
cccgcagaacaggccgccggcgct[A/G]tggagaccggcggagcttcccgct
- ASB in cell types
- primary B-CLL cells macrophages form periferal blood foreskin keratinocyte 22RV1 (prostate carcinoma)
- ASB for transcription factors
- SPI1_HUMAN RBBP5_HUMAN BRD4_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.09 | 2.87 | 2.12 | n/a | No Hit | |||
| RBBP5_HUMAN | n/a | 2.82 | 2.50 | n/a | n/a | |||
| BRD4_HUMAN | 0.66 | 2.12 | 1.21 | n/a | n/a | |||
| CTCF_HUMAN | 0.35 | 0.85 | 1.40 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Thyroid, Whole_Blood