rs11147281 chr12:133181368 T>C
- Sequence
aggaaggcctgagcttccgggtca[T/C]cttagcacgccccctcccggtggc
- ASB in cell types
- CD14+ monocytes K562 (myelogenous leukemia) CD34+ hematopoietic stem cells primary B-CLL cells
- ASB for transcription factors
- STAT1_HUMAN TIF1B_HUMAN TYY1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.32 | n/a | 2.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 3.11 | 0.29 | 2.00 | n/a | n/a | |||
| TYY1_HUMAN | 1.77 | 0.05 | 1.44 | n/a | No Hit | |||
| RAD21_HUMAN | 0.92 | 0.28 | 1.26 | n/a | n/a | |||
| ETS1_HUMAN | 1.51 | -0.23 | 1.11 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Stomach, Testis, Thyroid, Whole_Blood