rs11148503 chr13:60591572 C>T
- Sequence
ttgtcttcactcgtacgcatcgtg[C/T]gtggtaagttccccggggaagtga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) EOL-1 (Acute myeloid leukemia)
- ASB for transcription factors
- IKZF2_HUMAN SMRC1_HUMAN IKZF1_HUMAN MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | n/a | 4.12 | 1.00 | n/a | n/a | |||
| SMRC1_HUMAN | -4.27 | 2.80 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -4.37 | 2.47 | 1.50 | n/a | n/a | |||
| MTA2_HUMAN | -4.29 | 2.46 | 1.50 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis