rs11149682 chr16:84811043 C>T

Sequence
tacgacatcgcgcagtagagcccc[C/T]agcttctcgtagagatgcaatcat
ASB in cell types
EOL-1 (Acute myeloid leukemia) MDM(monocyte derived macrophages)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN TF65_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -3.08 2.96 1.001.0·10-3 1.00 n/a n/a
SMCA4_HUMAN -3.08 2.96 1.001.6·10-3 1.00 n/a n/a
TF65_HUMAN n/a 3.32 1.007.2·10-3 2.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Whole_Blood

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