rs11152924 chr6:96429507 A>G

Sequence
attctggttctggatgtttgatga[A/G]tcatcacaccatcttccacagtgg
ASB in cell types
HCASMC (Human coronary artery smooth muscle cells) Th1-cells
ASB for transcription factors
JUND_HUMAN TBX21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
JUND_HUMAN n/a 1.72 1.005.7·10-6 1.50 9.10 Concordant
TBX21_HUMAN 2.50 -2.08 6.7·10-41.00 1.50 -0.29 Weak Concordant
Items per page:
1 – 2 of 2

Motif analysis

TBX21_HUMAN Weak Concordant
TBX21_HUMAN pic

Genetic associations

GRASP systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Colon_Transverse Whole_Blood

Download