rs11154342 chr6:126054569 T>A

Sequence
acagtgctgacggtgtaggcctgc[T/A]gaagagcaagctgatgaaaataaa
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) MDA-MB-453 (breast adenocarcinoma) VCaP (prostate carcinoma)
ASB for transcription factors
GATA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA2_HUMAN 2.34 0.77 0.051.00 2.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  advanced age-related macular degeneration,  height,  ldl cholesterol change with statins,  total cholesterol change with statins,  waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts,  Muscle_Skeletal,  Pancreas,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid

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