rs11154342 chr6:126054569 T>A

Sequence
acagtgctgacggtgtaggcctgc[T/A]gaagagcaagctgatgaaaataaa
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) MDA-MB-453 (breast adenocarcinoma) VCaP (prostate carcinoma)
ASB for transcription factors
GATA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA2_HUMAN 2.34 0.77 0.051.00 2.33 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose advanced age-related macular degeneration height ldl cholesterol change with statins total cholesterol change with statins waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal Pancreas Skin_Sun_Exposed_Lower_leg Stomach Thyroid

Download