rs11154411 chr6:127463856 G>A

Sequence
tataggcctgaaacactgtgcccc[G/A]cctaaactcattcttctgcatgtt
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.24 -0.75 0.011.00 2.00 0.11 Weak Discordant
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Motif analysis

ANDR_HUMAN Weak Discordant
ANDR_HUMAN pic

Genetic associations

GRASP hdl cholesterol,  systolic blood pressure (sbp),  triglycerides change with statins,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Colon_Transverse,  Esophagus_Muscularis,  Lung,  Testis,  Thyroid,  Whole_Blood

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