rs11155126 chr6:140778258 C>T

Sequence
gaaacattgtaaatatacacaaag[C/T]aagttgctcaatagtttcaattgc
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.08 0.03 3.2·10-31.00 1.49 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Hippocampus,  Brain_Hypothalamus,  Brain_Spinal_cord_cervical_c-1,  Cells_Cultured_fibroblasts,  Heart_Left_Ventricle,  Nerve_Tibial,  Pancreas,  Pituitary,  Spleen,  Testis,  Thyroid,  Whole_Blood

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