rs11160833 chr14:105090717 C>G
- Sequence
ttaggacacagcagtgctgcttat[C/G]tgggagcccaggggctggggacag
- ASB in cell types
- HEK293 (embryonic kidney) HeLa (cervical adenocarcinoma) tibial artery HeLa S3 (cervical adenocarcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.71 | 0.24 | 1.99 | |||
| HeLa (cervical adenocarcinoma) | -0.85 | 1.39 | 2.00 | |||
| tibial artery | -1.31 | 1.31 | 1.00 | |||
| HeLa S3 (cervical adenocarcinoma) | 0.06 | 1.28 | 2.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid