rs11161588 chr1:85298178 G>A
- Sequence
taggttttccatttattgttgtga[G/A]gccatgtgatacttaatgacactg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) breast tumor
- ASB for transcription factors
- SRF_HUMAN SKIL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | 3.58 | -3.31 | 1.00 | n/a | No Hit | |||
| SKIL_HUMAN | 2.56 | -2.35 | 1.00 | n/a | n/a |
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