rs11162518 chr1:78608126 G>A

Sequence
gcttgatggtggggaggggtgtcc[G/A]ccattgctgaaggtagctcacagt
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA1_HUMAN FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.26 -0.61 7.1·10-31.00 1.36 n/a No Hit
FOXA2_HUMAN 0.90 -0.27 0.051.00 1.17 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts

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