rs11166592 chr8:134564765 G>T
- Sequence
ctgaacacattactggaccctagt[G/T]attgttgtcaataattgcatcata
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.94 | -0.35 | 1.19 | -3.04 | Concordant | |||
| STAG1_HUMAN | 1.34 | -0.78 | 1.12 | n/a | n/a |
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Motif analysis
