rs11166985 chr8:140634077 A>G
- Sequence
cccaagagggggcctggccaccca[A/G]ggcctctagaggccagcacctgct
- ASB in cell types
- T47D (invasive ductal carcinoma) K562 (myelogenous leukemia) PANC1 (pancreatic ductal adenocarcinoma) epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.28 | 0.35 | 1.38 | 0.00 | Weak Discordant |
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Motif analysis
