rs11168020 chr5:148098779 G>A

Sequence
gtgatagatagaccatggtcttga[G/A]ggaggagaccttggttgtagtcat
ASB in cell types
LHSAR (prostate epithelial cells)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 1.92 0.17 2.8·10-31.00 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  birth weight,  ldl cholesterol,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Coronary,  Breast_Mammary_Tissue,  Colon_Sigmoid,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Minor_Salivary_Gland,  Muscle_Skeletal,  Pancreas,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Stomach,  Thyroid

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