rs11168975 chr12:49322999 T>C

Sequence
caatggccggcccctagccggtcc[T/C]gaggcctcgcgagagctcccgtgg
ASB in cell types
breast tumor CD14+ monocytes
ASB for transcription factors
ESR1_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 3.19 0.21 8.6·10-40.98 2.00 n/a No Hit
STAT1_HUMAN 1.75 -0.56 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Breast_Mammary_Tissue Esophagus_Mucosa Lung Minor_Salivary_Gland Nerve_Tibial Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid

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