rs11169820 chr12:51368758 T>C

Sequence
cagacaggtgaggtgattatgaca[T/C]ggcgctcatttatgaatggattct
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts K562 (myelogenous leukemia)
ASB for transcription factors
GATA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN 1.98 -1.26 8.6·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels ldl cholesterol total cholesterol triglycerides
GTEx eQTL Adrenal_Gland Artery_Tibial Cells_Cultured_fibroblasts Lung Pituitary Skin_Sun_Exposed_Lower_leg Stomach Testis Whole_Blood

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