rs11174754 chr12:63038793 T>C
- Sequence
gcatccactttccacaagtgggat[T/C]gtcaacaaagatgcgaagacaaca
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) VCaP (prostate carcinoma) LNCaP95
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.47 | -0.54 | 1.46 | -1.87 | Weak Concordant | |||
| ANDR_HUMAN | 1.83 | -0.26 | 1.44 | n/a | No Hit |
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Motif analysis
