rs11176824 chr12:40484711 G>A
- Sequence
tgacagggacaactagatcatcag[G/A]tggagtgacagggataactggact
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GSC23 (Glioblastoma) HT1080 (fibrosarcoma)
- ASB for transcription factors
- CTCF_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -2.83 | 2.99 | 1.00 | n/a | No Hit | |||
| SSRP1_HUMAN | n/a | 2.84 | 1.00 | n/a | n/a |
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