rs11177766 chr12:69649823 G>C

Sequence
ctctggctgagagccactggccta[G/C]acaaaaaacctggaacgcaccagc
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.98 2.60 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  advanced age-related macular degeneration,  advanced age-related macular degeneration (geographic atrophy),  mitral annular calcium,  serum creatinine,  triglycerides,  years of education
GTEx eQTL Artery_Tibial,  Brain_Frontal_Cortex_BA9,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg

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