rs11177794 chr12:69688978 G>A

Sequence
gagaacatgtactttttcttacag[G/A]tgattttatgtagagaattcaact
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.44 -5.29 5.3·10-31.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  advanced age-related macular degeneration (geographic atrophy),  ldl cholesterol,  salmonella-induced pyroptosis,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial,  Whole_Blood

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