rs11178579 chr12:71063424 G>T

Sequence
catgcactttttccagtttgaacc[G/T]ctgaagccttccctaagactgttt
ASB in cell types
LNCaP (prostate carcinoma)
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.55 -0.60 0.011.00 1.36 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight hdl cholesterol ldl cholesterol total cholesterol triglycerides
GTEx eQTL Artery_Tibial Brain_Substantia_nigra Colon_Transverse Liver Muscle_Skeletal Nerve_Tibial Small_Intestine_Terminal_Ileum Testis

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