rs11183104 chr12:45548031 T>C
- Sequence
gcccctccttccccacaagatgtc[T/C]ctgtcctagtcaccagaacctgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) spleen
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | 0.81 | 1.47 | 0.46 | Weak Discordant |
Items per page:
1 – 1 of 1
Motif analysis
