rs11183396 chr12:46210578 A>G

Sequence
gtccccaccgaaatctcaccttga[A/G]ttgtaactcccataatttccacgt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN REQU_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.09 1.70 1.001.4·10-3 1.25 n/a n/a
IKZF2_HUMAN 0.05 2.07 1.003.8·10-3 1.00 n/a n/a
REQU_HUMAN -1.79 2.33 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

No data available

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