rs11233 chr19:55643352 G>A

Sequence
ttctgctctctggagcggtgaacc[G/A]gtggttgtctgcggggaagagatg
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ZBT11_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZBT11_HUMAN 0.23 2.08 0.843.2·10-3 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP alzheimers disease,  years of education
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Hippocampus,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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