rs112982587 chr1:16352086 A>G
- Sequence
aggagctgtcctcctcctcgcctc[A/G]ctcgaggacggcgatagcaagtca
- ASB in cell types
- HEK293 (embryonic kidney) primary B-CLL cells
- ASB for transcription factors
- BRD4_HUMAN ZN335_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 1.70 | 1.10 | 1.60 | n/a | n/a | |||
| ZN335_HUMAN | 1.58 | n/a | 2.00 | -3.30 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Muscularis, Lung, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Whole_Blood