rs112995015 chr17:27456558 C>T
- Sequence
gcagcgccgaggggcgctcctggt[C/T]cagctctcctggctcgggggttcc
- ASB in cell types
- K562 (myelogenous leukemia) GM19240 (B cells Lymphoblastoid Cell Lines) keratinocytes
- ASB for transcription factors
- STAG1_HUMAN SNAI2_HUMAN NRF1_HUMAN ILF3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.31 | 1.42 | 1.04 | n/a | n/a | |||
| SNAI2_HUMAN | -2.34 | 2.29 | 1.00 | n/a | No Hit | |||
| NRF1_HUMAN | -0.65 | 1.89 | 2.00 | n/a | No Hit | |||
| ILF3_HUMAN | -1.00 | 2.03 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Cerebellum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Testis, Whole_Blood