rs113018699 chr1:16889604 C>G

Sequence
ctcggtggtcctgccgggcgggct[C/G]tgggagtagagggaagggagttag
ASB in cell types
HT1080 (fibrosarcoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HT1080 (fibrosarcoma) 2.11 -1.38 6.9·10-31.00 1.67
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Motif analysis

No data available

Genetic associations

EMBL-EBI waist circumference adjusted for body mass index
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid,  Whole_Blood

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