rs113020732 chr21:42654441 C>G
- Sequence
ataggaagtccctcgaatgtccag[C/G]gttcctagcggacttgagttacac
- ASB in cell types
- 22RV1 (prostate carcinoma) GM23248
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.21 | -1.12 | 2.50 | -1.81 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Coronary, Brain_Hippocampus, Esophagus_Muscularis, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg