rs113037555 chr15:78149544 T>G
- Sequence
tgggccagacagggaggcggtggc[T/G]gcccgcggggacagcttgggagcc
- ASB in cell types
- 22RV1 (prostate carcinoma) primary B-CLL cells
- ASB for transcription factors
- ANDR_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.74 | -5.07 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.61 | n/a | 3.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Cerebellum, Brain_Putamen_basal_ganglia, Esophagus_Mucosa, Minor_Salivary_Gland, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid