rs113065538 chr4:2418701 C>A
- Sequence
gccgcgagccccgggcccaccgcg[C/A]gctgcgggcggggcgggcggggcg
- ASB in cell types
- keratinocytes GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- SNAI2_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.16 | -0.89 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.28 | 1.08 | 1.30 | -0.73 | Weak Discordant |
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Motif analysis
