rs113066999 chr22:29883080 C>A
- Sequence
gtccaggccccgcccccgtccaac[C/A]ggcggagacccgccccctttcccg
- ASB in cell types
- keratinocytes HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- SNAI2_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 1.35 | -2.53 | 1.50 | n/a | No Hit | |||
| TCF21_HUMAN | 1.13 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Thyroid