rs113147070 chr4:83034644 C>T
- Sequence
caggcgtgagccaccgcgcccggc[C/T]gaaaggggggatattaatcattac
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.86 | -2.57 | 1.00 | -0.35 | Weak Concordant | |||
| STAG1_HUMAN | 1.60 | -0.14 | 1.11 | n/a | n/a |
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Motif analysis
