rs113150036 chr20:23890060 G>T
- Sequence
gtacgggttctgcagaggcccgtc[G/T]gcttggttctgtcctcgctgccct
- ASB in cell types
- foreskin keratinocyte SYO-1(Biphasic synovial sarcoma) GM18486 (Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.53 | -0.20 | 1.35 | n/a | No Hit | |||
| STAG1_HUMAN | 0.74 | -0.11 | 1.11 | n/a | n/a |
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