rs113169709 chr1:32876829 C>T
- Sequence
agcctgggcacagccagcagaggg[C/T]gccacctcagccacagtgaagccc
- ASB in cell types
- epithelial cell of prostate WA09 (embryonic stem cells) gastrocnemius medialis glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.24 | -0.09 | 1.30 | -5.21 | Concordant | |||
| RAD21_HUMAN | 1.58 | -0.34 | 1.42 | n/a | n/a |
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Motif analysis
