rs113179876 chr12:52116802 T>C
- Sequence
tgcatacctgccaccttgtggggt[T/C]tccatactgcttctaataattgca
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.67 | -1.92 | 1.44 | n/a | n/a | |||
| CTCF_HUMAN | 1.42 | 0.30 | 1.13 | n/a | No Hit |
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