rs113191396 chr19:19866109 G>A

Sequence
cagtcagctccacaatctgccgcc[G/A]gagttctccctgcccagctcggcc
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
PRD10_HUMAN CTBP1_HUMAN IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRD10_HUMAN n/a 2.16 1.002.9·10-5 2.00 n/a n/a
CTBP1_HUMAN -1.89 2.84 1.000.03 2.00 n/a n/a
IKZF1_HUMAN -1.00 1.80 1.000.04 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Putamen_basal_ganglia Lung Nerve_Tibial Thyroid

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