rs113202990 chr10:3462005 G>C
- Sequence
tgggtcccagatcttttatggcat[G/C]atcctctagggggaggcaggatcc
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.14 | 1.44 | 1.61 | 1.35 | Weak Concordant | |||
| STAG1_HUMAN | -3.48 | 1.89 | 1.92 | n/a | n/a |
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Motif analysis
