rs113210477 chr13:45341377 C>T
- Sequence
gacacaaggctccgttccactggg[C/T]acgccagcgggtaggggtgggggc
- ASB in cell types
- 22RV1 (prostate carcinoma) HAEC (human aortic endothelial cells) monocytes from periferal blood
- ASB for transcription factors
- ANDR_HUMAN TF65_HUMAN SRBP2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.94 | -5.07 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 2.90 | n/a | 2.00 | n/a | No Hit | |||
| SRBP2_HUMAN | 2.50 | n/a | 3.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellum, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Lung, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid