rs113234981 chr19:33795936 G>T
- Sequence
acgtcacgggagaggggcagcggg[G/T]cagagaccctgggagggcggccag
- ASB in cell types
- A549 (lung carcinoma) breast tumor
- ASB for transcription factors
- JUN_HUMAN ESR1_HUMAN CREB1_HUMAN ILF3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 0.30 | 1.23 | 1.92 | n/a | No Hit | |||
| ESR1_HUMAN | 2.46 | -0.20 | 2.00 | 1.93 | Weak Discordant | |||
| CREB1_HUMAN | -3.37 | 1.36 | 1.88 | n/a | No Hit | |||
| ILF3_HUMAN | 2.02 | -0.90 | 2.00 | n/a | n/a |
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Motif analysis
