rs113294417 chr13:30674166 C>A
- Sequence
gggctgagaagtcgcggggcgcgc[C/A]gaggaggcagcggaagcggccgag
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line) 2588 (Lymphoblastoid Cell Lines) HEK293T (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN TYY1_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.89 | 1.87 | 1.86 | n/a | No Hit | |||
| TYY1_HUMAN | 0.19 | 1.83 | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | -0.70 | 0.99 | 1.47 | n/a | n/a |
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