rs113391408 chr22:20285919 C>T
- Sequence
ccctctgctgccctctgccggccg[C/T]ctctgtccctgcaggcccagccat
- ASB in cell types
- glioblastoma cells GM12878 (female B-cells lymphoblastoid cell line) Peyer's patch GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.35 | 0.30 | 2.14 | n/a | No Hit | |||
| STAG1_HUMAN | 2.77 | 4.42 | 2.32 | n/a | n/a | |||
| RAD21_HUMAN | 1.30 | 0.23 | 1.79 | n/a | n/a |
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