rs11341 chr12:51352038 T>C

Sequence
ggctccagaaggctctcagggatg[T/C]aggcggcctcccgcagggttgagt
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPT5H_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPT5H_HUMAN -2.34 2.45 1.000.02 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration,  advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
GTEx eQTL Adrenal_Gland,  Artery_Aorta,  Cells_Cultured_fibroblasts,  Ovary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis

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