rs113456718 chr17:7014771 C>T
- Sequence
gggcgggacttcctgcgcgggggc[C/T]cgagccgctcagtctccctgctct
- ASB in cell types
- adult erythroblasts breast tumor MOLT-4 (Adult T acute lymphoblastic leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN RBBP5_HUMAN ANDR_HUMAN SPT5H_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.03 | -5.54 | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.78 | n/a | 4.00 | n/a | n/a | |||
| ANDR_HUMAN | 2.19 | -4.22 | 2.00 | n/a | No Hit | |||
| SPT5H_HUMAN | 0.18 | 1.41 | 1.80 | n/a | n/a | |||
| TF65_HUMAN | 1.10 | -0.06 | 2.08 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Frontal_Cortex_BA9, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood