rs113481070 chr15:99015076 C>A
- Sequence
ggaccggcgagcggggggcctgga[C/A]gtcgagtgcggggccggcggggcc
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma) A549 (lung carcinoma)
- ASB for transcription factors
- ESR1_HUMAN ANDR_HUMAN JUN_HUMAN LMBL2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.86 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 3.20 | n/a | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.75 | 1.18 | 1.00 | n/a | No Hit | |||
| LMBL2_HUMAN | 2.58 | -1.59 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Nucleus_accumbens_basal_ganglia, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pituitary, Testis