rs113511609 chr10:110210161 C>T

Sequence
gcgcgccgggcttgggctgccccg[C/T]gcggggcgggcccgtggcggcgta
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN 2.71 -1.91 8.3·10-31.00 2.00 -0.14 Weak Concordant
ANDR_HUMAN 2.54 -1.75 0.041.00 2.00 n/a No Hit
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Motif analysis

ESR1_HUMAN Weak Concordant
ESR1_HUMAN pic

Genetic associations

EMBL-EBI white blood cell count
GTEx eQTL Artery_Aorta Brain_Cerebellar_Hemisphere Brain_Cerebellum Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Pituitary Testis Whole_Blood

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